miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30991	+	774	88	24.5	-30			5' arm      3' arm
31090	+	101040	88	24	-25.5			5' arm      3' arm
31089	+	100579	90	22	-26			5' arm      3' arm
31069	+	83101	87	20.5	-26.5			5' arm      3' arm
31065	+	79306	89	20.5	-21.2			5' arm      3' arm
31014	+	35565	83	21	-33.2			5' arm      3' arm
31020	+	40698	89	21.5	-24.8			5' arm      3' arm
31013	+	34523	88	21.5	-20.5			5' arm      3' arm
31019	+	39960	89	19	-25			5' arm      3' arm
31128	-	1502	87	21	-24.8			5' arm      3' arm
31104	+	120423	89	23	-27			5' arm      3' arm
31103	+	120161	88	21.5	-33.4			5' arm      3' arm
30994	+	1901	88	22.5	-28.8			5' arm      3' arm
30992	+	1416	90	22	-23.8			5' arm      3' arm
30993	+	1682	90	20.5	-29.4			5' arm      3' arm
30995	+	8813	90	24	-32.5			5' arm      3' arm
31000	+	12484	90	25.5	-34.8			5' arm      3' arm
31093	+	103900	89	19.5	-29.2			5' arm      3' arm
30999	+	11815	87	22	-26.8			5' arm      3' arm
31091	+	102837	89	21.5	-19.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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