miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31144	-	13999	89	21	-36.7	YP_164447		5' arm      3' arm
31056	+	65768	88	21	-36.6	YP_164474		5' arm      3' arm
31261	-	134873	87	22	-35.5	YP_164506		5' arm      3' arm
31167	-	40496	85	23	-35.1	YP_164462		5' arm      3' arm
31057	+	66479	90	21.5	-35	YP_164475		5' arm      3' arm
31239	-	104980	90	23	-35	YP_164494		5' arm      3' arm
31000	+	12484	90	25.5	-34.8			5' arm      3' arm
31231	-	100566	90	19.5	-34.5	YP_164490		5' arm      3' arm
31094	+	104891	90	20	-34.1	YP_164494		5' arm      3' arm
31247	-	111225	90	22.5	-33.7	YP_164498		5' arm      3' arm
31203	-	78898	90	20.5	-33.5	YP_164479		5' arm      3' arm
31103	+	120161	88	21.5	-33.4			5' arm      3' arm
31133	-	3369	88	21.5	-33.4			5' arm      3' arm
31014	+	35565	83	21	-33.2			5' arm      3' arm
31066	+	79867	90	23.5	-33	YP_164480		5' arm      3' arm
31031	+	47570	89	21.5	-32.8	YP_164466		5' arm      3' arm
31195	-	65855	88	21.5	-32.6	YP_164474		5' arm      3' arm
31250	-	114717	90	24	-32.5			5' arm      3' arm
30995	+	8813	90	24	-32.5			5' arm      3' arm
31215	-	86551	90	22	-32.4	YP_164482		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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