miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6586	-	57975	90	22.5	-21.6	NP_045331		5' arm      3' arm
6674	-	116584	88	20	-21.6	NP_045368		5' arm      3' arm
6489	+	114846	86	21	-21.6	NP_045366		5' arm      3' arm
6388	+	37413	90	21	-21.6	NP_045322		5' arm      3' arm
6584	-	56438	89	22.5	-21.6	NP_045331		5' arm      3' arm
6513	+	131834	90	22.5	-21.8	NP_045364		5' arm      3' arm
6375	+	26268	89	19	-21.8	NP_045320		5' arm      3' arm
6659	-	106384	90	22.5	-21.8	NP_045364		5' arm      3' arm
6507	+	126601	84	19.5	-21.8			5' arm      3' arm
6665	-	111617	84	19.5	-21.8			5' arm      3' arm
6555	-	26322	89	20.5	-21.8	NP_045320		5' arm      3' arm
6468	+	93452	87	23.5	-21.9	NP_045353		5' arm      3' arm
6519	-	3199	89	21.5	-21.9	NP_045305		5' arm      3' arm
6487	+	110930	86	25.5	-21.9			5' arm      3' arm
6573	-	50523	90	22	-21.9	NP_045329		5' arm      3' arm
6686	-	127288	86	25.5	-21.9			5' arm      3' arm
6385	+	32454	88	22	-21.9	NP_045322		5' arm      3' arm
6547	-	22788	89	22.5	-22	NP_045318		5' arm      3' arm
6455	+	84254	89	19	-22	NP_045348		5' arm      3' arm
6597	-	64076	89	21	-22	NP_045336		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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