miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22434	-	9590	90	19	-23.8	NP_878213		5' arm      3' arm
22413	+	19653	83	20.5	-23.8	NP_878224		5' arm      3' arm
22425	-	2556	89	19	-23.7	NP_878200		5' arm      3' arm
22402	+	6876	89	23	-23.4	NP_878206		5' arm      3' arm
22422	-	1567	86	19	-23.4			5' arm      3' arm
22442	-	18560	90	21	-23.3	NP_878224		5' arm      3' arm
22421	+	29169	90	21	-23.3			5' arm      3' arm
22396	+	3077	87	20.5	-23			5' arm      3' arm
22410	+	12858	90	20	-22.9	NP_878217		5' arm      3' arm
22433	-	9098	89	23.5	-22.8	NP_878212		5' arm      3' arm
22430	-	5895	87	20	-22.6	NP_878203		5' arm      3' arm
22401	+	6771	89	22	-22.6	NP_878206		5' arm      3' arm
22439	-	16781	87	19.5	-22.4	NP_878220		5' arm      3' arm
22408	+	10616	90	24	-22.4	NP_878215		5' arm      3' arm
22395	+	2774	88	20.5	-22.3	NP_878200		5' arm      3' arm
22399	+	5674	89	19	-22.2	NP_878203		5' arm      3' arm
22435	-	9959	89	21.5	-22.2	NP_878213		5' arm      3' arm
22411	+	14411	87	19.5	-21.9			5' arm      3' arm
22424	-	2424	87	19	-21.9	NP_878200		5' arm      3' arm
22427	-	3966	89	22	-21.8	NP_878201		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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