miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22397	+	5348	88	22	-23.9	NP_878203		5' arm      3' arm
22401	+	6771	89	22	-22.6	NP_878206		5' arm      3' arm
22405	+	9266	88	21.5	-28.1	NP_878212		5' arm      3' arm
22400	+	6321	88	21	-28.2	NP_878204		5' arm      3' arm
22403	+	7340	90	21	-20.8	NP_878207		5' arm      3' arm
22398	+	5530	86	19	-20.3	NP_878203		5' arm      3' arm
22399	+	5674	89	19	-22.2	NP_878203		5' arm      3' arm
22408	+	10616	90	24	-22.4	NP_878215		5' arm      3' arm
22438	-	16509	81	19.5	-19.5	NP_878220		5' arm      3' arm
22435	-	9959	89	21.5	-22.2	NP_878213		5' arm      3' arm
22437	-	12061	89	20.5	-21.1	NP_878217		5' arm      3' arm
22436	-	11955	89	19.5	-27.2	NP_878217		5' arm      3' arm
22433	-	9098	89	23.5	-22.8	NP_878212		5' arm      3' arm
22439	-	16781	87	19.5	-22.4	NP_878220		5' arm      3' arm
22441	-	18235	90	20	-20.1	NP_878224		5' arm      3' arm
22440	-	17598	90	21	-26.1			5' arm      3' arm
22442	-	18560	90	21	-23.3	NP_878224		5' arm      3' arm
22444	-	19754	90	21.5	-21.3	NP_878224		5' arm      3' arm
22443	-	18794	86	22.5	-23.9	NP_878224		5' arm      3' arm
22422	-	1567	86	19	-23.4			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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