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| GenBank Identifier | RefSeq Acc. | Name |
| 30984428 | NC_004812.1 | Cercopithecine herpesvirus 1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 21433 | + | 58185 | 90 | 19.5 | -21.7 | NP_851889 | 5' arm 3' arm | ||
| 21434 | + | 58598 | 88 | 19 | -21.5 | NP_851889 | 5' arm 3' arm | ||
| 21435 | + | 58690 | 85 | 20 | -22.3 | NP_851889 | 5' arm 3' arm | ||
| 21436 | + | 58877 | 90 | 22 | -22.5 | NP_851889 | 5' arm 3' arm | ||
| 21437 | + | 59367 | 89 | 22.5 | -23.5 | NP_851889 | 5' arm 3' arm | ||
| 21438 | + | 59603 | 90 | 23 | -25.9 | NP_851889 | 5' arm 3' arm | ||
| 21439 | + | 60216 | 88 | 19 | -28.4 | NP_851889 | 5' arm 3' arm | ||
| 21440 | + | 60379 | 86 | 22 | -22.6 | NP_851889 | 5' arm 3' arm | ||
| 21441 | + | 60628 | 90 | 19.5 | -21 | NP_851889 | 5' arm 3' arm | ||
| 21442 | + | 60823 | 89 | 22 | -22.6 | NP_851889 | 5' arm 3' arm | ||
| 21443 | + | 61166 | 88 | 21.5 | -23 | NP_851889 | 5' arm 3' arm | ||
| 21444 | + | 61748 | 89 | 26 | -23.6 | 5' arm 3' arm | |||
| 21445 | + | 62476 | 90 | 21 | -28.3 | NP_851890 | 5' arm 3' arm | ||
| 21446 | + | 62730 | 88 | 19 | -24.8 | NP_851890 | 5' arm 3' arm | ||
| 21447 | + | 63380 | 90 | 19.5 | -25.5 | NP_851890 | 5' arm 3' arm | ||
| 21448 | + | 63873 | 89 | 21 | -22.7 | NP_851890 | 5' arm 3' arm | ||
| 21449 | + | 64597 | 90 | 20 | -23.8 | NP_851890 | 5' arm 3' arm | ||
| 21450 | + | 64772 | 90 | 20.5 | -24.1 | NP_851890 | 5' arm 3' arm | ||
| 21451 | + | 65104 | 87 | 20.5 | -30.4 | NP_851890 | 5' arm 3' arm | ||
| 21452 | + | 66244 | 86 | 20.5 | -31.5 | NP_851891 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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