miRNA display CGI


Results 1 - 20 of 56 are showing below:
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GenBank Identifier RefSeq Acc. Name
9625875 NC_001348.1 Human herpesvirus 3 (strain Dumas)

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2111 - 123752 89 20 -25.7 NP_040184 5' arm      3' arm
2110 - 123414 88 22 -31.7 NP_040193 5' arm      3' arm
2109 - 123006 90 19 -22.5 NP_040193 5' arm      3' arm
2108 - 122458 89 23 -25 NP_040184 5' arm      3' arm
2107 - 122137 84 19.5 -25.5 NP_040193 5' arm      3' arm
2106 - 121721 86 22 -26.1 NP_040184 5' arm      3' arm
2105 - 121275 87 19 -25.71 NP_040184 5' arm      3' arm
2104 - 121142 86 20.5 -20.3 NP_040193 5' arm      3' arm
2103 - 113483 89 20 -23.6 NP_040188 5' arm      3' arm
2102 - 111700 89 21 -20.8 NP_040191 5' arm      3' arm
2101 - 108096 89 23 -29.7 NP_040184 5' arm      3' arm
2100 - 107943 89 19.5 -20.8 NP_040184 5' arm      3' arm
2099 - 107661 90 21 -29.4 NP_040193 5' arm      3' arm
2098 - 106765 87 19 -29.1 NP_040184 5' arm      3' arm
2097 - 106570 88 19.5 -23.6 NP_040184 5' arm      3' arm
2096 - 106357 89 24.5 -22.9 NP_040184 5' arm      3' arm
2095 - 105985 90 20.5 -20.7 NP_040193 5' arm      3' arm
2094 - 100348 89 22 -27.1 5' arm      3' arm
2093 - 99051 87 19 -21.8 NP_040178 5' arm      3' arm
2092 - 93086 88 19.5 -26 NP_040175 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.