miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20451028 NC_003783.1 Triatoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15150 + 2039 90 27.5 -23 NP_620562 5' arm      3' arm
15151 + 3098 88 26 -22.4 NP_620562 5' arm      3' arm
15153 + 3575 88 23 -28.2 NP_620562 5' arm      3' arm
15152 + 3224 79 21.5 -25.1 NP_620562 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.