miRNA display CGI


Results 1 - 20 of 285 are showing below:
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GenBank Identifier RefSeq Acc. Name
51557483 NC_006151.1 Suid herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
29650 - 139053 86 20 -22.7 YP_068393 5' arm      3' arm
29633 - 119789 87 20 -21.8 YP_068386 5' arm      3' arm
29631 - 118835 87 19 -23.1 YP_068384 5' arm      3' arm
29522 - 325 89 19.5 -21.2 5' arm      3' arm
29646 - 130343 89 23 -27.3 5' arm      3' arm
29645 - 130225 88 22.5 -21.4 5' arm      3' arm
29644 - 129944 86 19.5 -19.9 5' arm      3' arm
29641 - 126148 86 22.5 -26.24 YP_068391 5' arm      3' arm
29638 - 120743 89 22.5 -26.8 YP_068386 5' arm      3' arm
29636 - 120408 90 20 -32.2 YP_068386 5' arm      3' arm
29637 - 120566 88 20.5 -21.5 YP_068386 5' arm      3' arm
29642 - 128126 88 19 -29.1 YP_068383 5' arm      3' arm
29648 - 135504 83 21 -21.4 5' arm      3' arm
29635 - 120252 88 23 -36 YP_068386 5' arm      3' arm
29647 - 134122 86 20 -26.4 5' arm      3' arm
29640 - 125327 90 21 -23.5 5' arm      3' arm
29632 - 119132 90 20.5 -26.4 YP_068385 5' arm      3' arm
29634 - 119921 85 19 -25.42 YP_068386 5' arm      3' arm
29649 - 136309 89 19 -24 5' arm      3' arm
29643 - 129666 88 21.5 -19.9 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.