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GenBank Identifier | RefSeq Acc. | Name |
9633477 | NC_000903.1 | Snakehead rhabdovirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA![]() |
Match to own genomic region# | Target prediction with RNAhybrid |
997 | + | 2769 | 88 | 21.5 | -19.8 | NP_050582 | 5' arm 3' arm | ||
996 | + | 260 | 88 | 20 | -23 | NP_050580 | 5' arm 3' arm | ||
998 | + | 10277 | 90 | 22 | -20.3 | NP_050585 | 5' arm 3' arm | ||
1000 | - | 3073 | 89 | 23 | -24 | 5' arm 3' arm | |||
1001 | - | 5067 | 89 | 20 | -19.5 | NP_050584 | 5' arm 3' arm | ||
999 | - | 1517 | 89 | 19.5 | -22 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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