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| GenBank Identifier | RefSeq Acc. | Name |
| 82503188 | NC_007605.1 | Human herpesvirus 4 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33324 | + | 68208 | 81 | 19 | -24.4 | YP_401657 | 5' arm 3' arm | ||
| 33325 | + | 68301 | 90 | 22 | -24.3 | YP_401657 | 5' arm 3' arm | ||
| 33326 | + | 70901 | 89 | 19.5 | -27.9 | YP_401659 | 5' arm 3' arm | ||
| 33327 | + | 71376 | 88 | 19 | -26.1 | YP_401659 | 5' arm 3' arm | ||
| 33328 | + | 72319 | 83 | 21.5 | -27.8 | YP_401662 | 5' arm 3' arm | ||
| 33329 | + | 74202 | 89 | 19.5 | -19.8 | YP_401662 | 5' arm 3' arm | ||
| 33330 | + | 74658 | 90 | 20 | -29.36 | YP_401663 | 5' arm 3' arm | ||
| 33331 | + | 74909 | 88 | 20.5 | -20.6 | YP_401663 | 5' arm 3' arm | ||
| 33332 | + | 75635 | 90 | 20 | -23.6 | YP_401664 | 5' arm 3' arm | ||
| 33333 | + | 75751 | 89 | 20 | -21.7 | YP_401664 | 5' arm 3' arm | ||
| 33334 | + | 77324 | 78 | 21 | -29.3 | YP_401667 | 5' arm 3' arm | ||
| 33335 | + | 77592 | 90 | 23 | -20.3 | YP_401667 | 5' arm 3' arm | ||
| 33336 | + | 78632 | 90 | 23 | -22 | YP_401667 | 5' arm 3' arm | ||
| 33337 | + | 81917 | 87 | 20 | -21.9 | YP_401669 | 5' arm 3' arm | ||
| 33338 | + | 82174 | 83 | 19 | -21.2 | YP_401669 | 5' arm 3' arm | ||
| 33339 | + | 85761 | 86 | 19 | -27.5 | YP_401670 | 5' arm 3' arm | ||
| 33340 | + | 91485 | 90 | 22 | -23.8 | YP_401674 | 5' arm 3' arm | ||
| 33341 | + | 91626 | 90 | 21 | -28.1 | YP_401674 | 5' arm 3' arm | ||
| 33342 | + | 92385 | 86 | 19.5 | -25.7 | YP_401674 | 5' arm 3' arm | ||
| 33343 | + | 99745 | 90 | 24 | -21.1 | YP_401681 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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