miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9625955 NC_001350.1 Saimiriine herpesvirus 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2112 + 481 88 21 -23.5 NP_040202 5' arm      3' arm
2113 + 2279 90 21.5 -26.4 5' arm      3' arm
2114 + 5005 89 22 -28.2 5' arm      3' arm
2115 + 22511 87 21 -21 NP_040211 5' arm      3' arm
2116 + 104064 89 23 -27.5 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.