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| GenBank Identifier | RefSeq Acc. | Name |
| 57790931 | NC_006623.1 | Gallid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 31346 | + | 146100 | 89 | 19.5 | -30.4 | YP_182411 | 5' arm 3' arm | ||
| 31347 | + | 146210 | 90 | 19.5 | -28.6 | YP_182397 | 5' arm 3' arm | ||
| 31330 | + | 115698 | 90 | 20 | -20.4 | YP_182411 | 5' arm 3' arm | ||
| 31365 | - | 110055 | 88 | 20 | -19.8 | 5' arm 3' arm | |||
| 31374 | - | 116077 | 89 | 20 | -29 | YP_182397 | 5' arm 3' arm | ||
| 31376 | - | 121874 | 89 | 20 | -23.6 | 5' arm 3' arm | |||
| 31343 | + | 139851 | 89 | 20 | -23.6 | 5' arm 3' arm | |||
| 31356 | - | 2243 | 88 | 20 | -19.7 | 5' arm 3' arm | |||
| 31340 | + | 133967 | 90 | 20 | -19.8 | YP_182406 | 5' arm 3' arm | ||
| 31345 | + | 145648 | 89 | 20 | -29 | YP_182411 | 5' arm 3' arm | ||
| 31386 | - | 134056 | 90 | 20 | -23.8 | YP_182406 | 5' arm 3' arm | ||
| 31396 | - | 146027 | 90 | 20 | -20.4 | YP_182411 | 5' arm 3' arm | ||
| 31392 | - | 140101 | 87 | 20 | -27.3 | 5' arm 3' arm | |||
| 31334 | + | 121624 | 87 | 20 | -27.3 | 5' arm 3' arm | |||
| 31319 | + | 55975 | 90 | 20 | -19.8 | YP_182365 | 5' arm 3' arm | ||
| 31318 | + | 28528 | 86 | 20.5 | -30.4 | 5' arm 3' arm | |||
| 31322 | + | 68204 | 85 | 20.5 | -28.4 | YP_182368 | 5' arm 3' arm | ||
| 31301 | + | 1411 | 90 | 20.5 | -28.4 | 5' arm 3' arm | |||
| 31323 | + | 110266 | 89 | 20.5 | -22.86 | YP_182396 | 5' arm 3' arm | ||
| 31324 | + | 111359 | 88 | 20.5 | -26.5 | YP_182396 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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