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| GenBank Identifier | RefSeq Acc. | Name |
| 57790931 | NC_006623.1 | Gallid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 31300 | + | 1202 | 90 | 24.5 | -26.7 | 5' arm 3' arm | |||
| 31299 | + | 658 | 88 | 25 | -22.1 | 5' arm 3' arm | |||
| 31303 | + | 1704 | 90 | 25.5 | -30.3 | 5' arm 3' arm | |||
| 31313 | + | 12164 | 89 | 20.5 | -25.7 | 5' arm 3' arm | |||
| 31307 | + | 2459 | 89 | 26 | -31.6 | 5' arm 3' arm | |||
| 31356 | - | 2243 | 88 | 20 | -19.7 | 5' arm 3' arm | |||
| 31366 | - | 112348 | 89 | 21.5 | -22.8 | 5' arm 3' arm | |||
| 31318 | + | 28528 | 86 | 20.5 | -30.4 | 5' arm 3' arm | |||
| 31315 | + | 25091 | 89 | 21.5 | -33.2 | 5' arm 3' arm | |||
| 31360 | - | 17045 | 90 | 19 | -21.7 | YP_182338 | 5' arm 3' arm | ||
| 31361 | - | 19848 | 90 | 23.5 | -23.6 | YP_182342 | 5' arm 3' arm | ||
| 31362 | - | 20063 | 88 | 20.5 | -24.7 | YP_182342 | 5' arm 3' arm | ||
| 31314 | + | 24208 | 89 | 22.5 | -26.3 | YP_182345 | 5' arm 3' arm | ||
| 31363 | - | 24110 | 80 | 20.5 | -20.2 | YP_182345 | 5' arm 3' arm | ||
| 31316 | + | 25437 | 90 | 19 | -22.2 | YP_182346 | 5' arm 3' arm | ||
| 31317 | + | 26890 | 90 | 22 | -22.7 | YP_182347 | 5' arm 3' arm | ||
| 31319 | + | 55975 | 90 | 20 | -19.8 | YP_182365 | 5' arm 3' arm | ||
| 31320 | + | 65806 | 90 | 21 | -23.39 | YP_182366 | 5' arm 3' arm | ||
| 31321 | + | 66196 | 82 | 19.5 | -20.7 | YP_182367 | 5' arm 3' arm | ||
| 31322 | + | 68204 | 85 | 20.5 | -28.4 | YP_182368 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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