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GenBank Identifier | RefSeq Acc. | Name |
50345893 | NC_002229.2 | Gallid herpesvirus 2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8682 | - | 132480 | 88 | 24.5 | -19.9 | 5' arm 3' arm | |||
8686 | - | 138188 | 89 | 19 | -25.9 | NP_057741 | 5' arm 3' arm | ||
8694 | - | 147963 | 90 | 19 | -20.6 | YP_053222 | 5' arm 3' arm | ||
8698 | - | 169387 | 90 | 21.5 | -19.7 | YP_053222 | 5' arm 3' arm | ||
8671 | - | 6283 | 87 | 27.5 | -31.4 | 5' arm 3' arm | |||
8677 | - | 77308 | 90 | 23 | -26.9 | NP_057795 | 5' arm 3' arm | ||
8688 | - | 139706 | 87 | 22 | -24.5 | 5' arm 3' arm | |||
8699 | - | 172476 | 88 | 25 | -25 | 3' arm | |||
8678 | - | 110448 | 89 | 21 | -20.12 | NP_057811 | 5' arm 3' arm | ||
8700 | - | 172598 | 86 | 26.5 | -20.7 | 3' arm | |||
8685 | - | 137791 | 87 | 21.5 | -27.4 | NP_057836 | 5' arm 3' arm | ||
8681 | - | 131956 | 89 | 24.5 | -25.6 | 5' arm 3' arm | |||
8690 | - | 140241 | 89 | 25.5 | -25.9 | 5' arm 3' arm | |||
8691 | - | 142527 | 88 | 21.5 | -25.5 | YP_053222 | 5' arm 3' arm | ||
8696 | - | 164695 | 89 | 23.5 | -21.3 | YP_053222 | 5' arm 3' arm | ||
8703 | - | 173642 | 87 | 20.5 | -21.8 | 5' arm 3' arm | |||
8660 | - | 2668 | 89 | 25 | -22.6 | NP_057833 | 5' arm 3' arm | ||
8668 | - | 5806 | 88 | 27.5 | -26.6 | NP_057748 | 5' arm 3' arm | ||
8673 | - | 11928 | 90 | 27 | -21.9 | NP_057752 | 5' arm 3' arm | ||
8676 | - | 67383 | 90 | 21.5 | -24.7 | NP_057788 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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