miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
21326584 NC_003977.1 Hepatitis B virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15467 + 1834 89 22.5 -24.9 YP_355335 5' arm      3' arm
15465 + 1152 89 21 -26.7 NP_647604 5' arm      3' arm
15466 + 1390 90 21 -21 NP_647604 5' arm      3' arm
15464 + 130 90 19 -25.7 YP_355333 5' arm      3' arm
15469 - 3114 89 21 -23.5 YP_355333 5' arm      3' arm
15468 - 2444 90 19 -19.7 YP_355335 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.