miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7999	-	117408	87	23.5	-19.8	NP_047757		5' arm      3' arm
7964	-	87456	90	21	-19.9	NP_047728		5' arm      3' arm
7737	+	79598	89	21	-19.9	NP_047720		5' arm      3' arm
7711	+	60359	84	19	-19.9	NP_047702		5' arm      3' arm
7899	-	38504	89	23	-19.9	NP_047674		5' arm      3' arm
7888	-	32461	88	20	-19.9	NP_047668		5' arm      3' arm
7947	-	78959	90	20	-20	NP_047720		5' arm      3' arm
7650	+	10062	85	24	-20			5' arm      3' arm
7889	-	32862	90	19	-20	NP_047783		5' arm      3' arm
7779	+	119334	90	23	-20	NP_047760		5' arm      3' arm
8023	-	129158	89	22.5	-20.1	NP_047768		5' arm      3' arm
7937	-	71411	89	21.5	-20.1	NP_047712		5' arm      3' arm
7696	+	45680	90	22	-20.2	NP_047684		5' arm      3' arm
7909	-	45993	89	22.5	-20.2			5' arm      3' arm
7691	+	41982	87	21.5	-20.2	NP_047680		5' arm      3' arm
8009	-	122580	86	19	-20.2	NP_047764		5' arm      3' arm
7668	+	22885	89	20.5	-20.2	NP_047658		5' arm      3' arm
7998	-	113338	89	19.5	-20.2	NP_047753		5' arm      3' arm
7635	+	432	90	22	-20.2			5' arm      3' arm
7974	-	97069	89	19	-20.21	NP_047734		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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