miRNA display CGI


Results 1 - 20 of 96 are showing below:
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GenBank Identifier RefSeq Acc. Name
9634221 NC_002169.1 Spodoptera exigua nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8568 - 105133 89 25.5 -28.4 5' arm      3' arm
8575 - 131506 87 20.5 -23.4 5' arm      3' arm
8574 - 129013 86 19.5 -21.3 5' arm      3' arm
8512 + 105045 89 27 -35.1 5' arm      3' arm
8525 + 120144 89 33 -37 5' arm      3' arm
8514 + 105294 89 31.5 -31.4 5' arm      3' arm
8513 + 105183 89 29 -27.7 5' arm      3' arm
8500 + 42250 89 27 -20.7 5' arm      3' arm
8506 + 71694 87 26 -29.3 5' arm      3' arm
8572 - 120230 85 28 -36.6 5' arm      3' arm
8570 - 105677 89 32.5 -30.9 5' arm      3' arm
8489 + 11439 90 22 -27.7 5' arm      3' arm
8569 - 105377 78 25.5 -31.5 5' arm      3' arm
8487 + 11033 90 31 -31.8 5' arm      3' arm
8484 + 10710 78 25 -31.8 5' arm      3' arm
8486 + 10931 90 25 -30.9 5' arm      3' arm
8485 + 10813 89 24 -31.9 5' arm      3' arm
8490 + 11565 90 24 -31.5 5' arm      3' arm
8488 + 11279 89 22.5 -27.1 5' arm      3' arm
8505 + 52703 87 29 -25.9 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.