miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28620	+	99	90	20.5	-25.4	YP_052942		5' arm      3' arm
28621	+	3798	80	19	-20	YP_052942		5' arm      3' arm
28622	+	133	89	19.5	-24	YP_052943		5' arm      3' arm
28623	+	1896	89	20.5	-23.2	YP_052944		5' arm      3' arm
28624	+	22	87	20	-22.3	YP_052945		5' arm      3' arm
28625	+	505	88	20	-27.7	YP_052945		5' arm      3' arm
28626	+	1774	90	19.5	-20.8	YP_052945		5' arm      3' arm
28627	-	393	90	21.5	-25.06	YP_052945		5' arm      3' arm
28628	+	278	89	21.5	-21.2	YP_052946		5' arm      3' arm
28629	+	443	88	19.5	-20.2	YP_052946		5' arm      3' arm
28630	+	736	80	19.5	-24.2	YP_052946		5' arm      3' arm
28631	+	1571	85	19.5	-29.6			5' arm      3' arm
28632	-	530	88	20	-21.7	YP_052946		5' arm      3' arm
28633	-	289	85	19.5	-23.9	YP_052948		5' arm      3' arm
28634	-	661	90	20.5	-23.2	YP_052948		5' arm      3' arm
28635	-	767	90	26	-24.4	YP_052948		5' arm      3' arm
28636	-	862	90	27	-30.4	YP_052948		5' arm      3' arm
28637	-	1463	87	23.5	-25			5' arm      3' arm
28638	+	735	86	20.5	-23.5	YP_052949		5' arm      3' arm
28639	+	1061	89	20.5	-22.7	YP_052949		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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