miRNA display CGI


Results 1 - 20 of 20 are showing below:
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GenBank Identifier RefSeq Acc. Name
50253405 NC_005997.1 Saint Croix river virus segment 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28620 + 99 90 20.5 -25.4 YP_052942 5' arm      3' arm
28621 + 3798 80 19 -20 YP_052942 5' arm      3' arm
28622 + 133 89 19.5 -24 YP_052943 5' arm      3' arm
28623 + 1896 89 20.5 -23.2 YP_052944 5' arm      3' arm
28624 + 22 87 20 -22.3 YP_052945 5' arm      3' arm
28625 + 505 88 20 -27.7 YP_052945 5' arm      3' arm
28626 + 1774 90 19.5 -20.8 YP_052945 5' arm      3' arm
28627 - 393 90 21.5 -25.06 YP_052945 5' arm      3' arm
28628 + 278 89 21.5 -21.2 YP_052946 5' arm      3' arm
28629 + 443 88 19.5 -20.2 YP_052946 5' arm      3' arm
28630 + 736 80 19.5 -24.2 YP_052946 5' arm      3' arm
28631 + 1571 85 19.5 -29.6 5' arm      3' arm
28632 - 530 88 20 -21.7 YP_052946 5' arm      3' arm
28633 - 289 85 19.5 -23.9 YP_052948 5' arm      3' arm
28634 - 661 90 20.5 -23.2 YP_052948 5' arm      3' arm
28635 - 767 90 26 -24.4 YP_052948 5' arm      3' arm
28636 - 862 90 27 -30.4 YP_052948 5' arm      3' arm
28637 - 1463 87 23.5 -25 5' arm      3' arm
28638 + 735 86 20.5 -23.5 YP_052949 5' arm      3' arm
28639 + 1061 89 20.5 -22.7 YP_052949 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.