miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
52627071 NC_005839.2 Agrotis segetum granulovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27252 - 38053 88 22 -23.6 YP_006306 5' arm      3' arm
27251 - 14315 90 21 -21.4 YP_006327 5' arm      3' arm
27250 - 11523 90 23.5 -20.3 YP_006331 5' arm      3' arm
27249 + 123715 89 24 -23.1 5' arm      3' arm
27248 + 108757 90 19.5 -24.8 YP_006231 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.