miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28394	+	56969	89	21	-25.9	YP_031629		5' arm      3' arm
28395	+	57228	89	20	-23.3			5' arm      3' arm
28396	+	59484	86	22	-27.2	YP_031631		5' arm      3' arm
28397	+	59838	89	19.5	-24.4	YP_031631		5' arm      3' arm
28398	+	60256	90	21	-24.3	YP_031631		5' arm      3' arm
28399	+	60896	86	19	-27.8			5' arm      3' arm
28400	+	61537	90	20	-24	YP_031633		5' arm      3' arm
28401	+	62077	88	19	-34.2	YP_031633		5' arm      3' arm
28402	+	62704	89	20	-20.4	YP_031635		5' arm      3' arm
28403	+	63933	88	19.5	-21.2	YP_031636		5' arm      3' arm
28404	+	64045	87	20	-21.5	YP_031636		5' arm      3' arm
28405	+	65109	90	19.5	-22.2	YP_031637		5' arm      3' arm
28406	+	66731	89	20	-27.9	YP_031638		5' arm      3' arm
28407	+	67235	88	20	-29.9	YP_031639		5' arm      3' arm
28408	+	69082	90	19.5	-21.4	YP_031639		5' arm      3' arm
28409	+	69491	90	20.5	-26.6	YP_031639		5' arm      3' arm
28410	+	69661	86	20	-19.4	YP_031639		5' arm      3' arm
28411	+	69955	90	20	-23.1	YP_031639		5' arm      3' arm
28412	+	71115	90	21	-26.2	YP_031641		5' arm      3' arm
28413	+	72164	90	23	-21.6	YP_031641		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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