miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
661	+	1637	88	23.5	-24.6	AP_000535		5' arm      3' arm
662	+	6671	87	20.5	-29.1	AP_000539		5' arm      3' arm
663	+	6868	85	19.5	-19.4	AP_000539		5' arm      3' arm
664	+	7692	90	20.5	-25.61	AP_000539		5' arm      3' arm
665	+	8057	89	21.5	-25.6	AP_000539		5' arm      3' arm
666	+	8963	89	22.5	-19.5	AP_000540		5' arm      3' arm
667	+	9530	89	23	-20.3	AP_000540		5' arm      3' arm
668	+	10165	89	20	-25.2	AP_000540		5' arm      3' arm
669	+	10593	88	23	-20.3			5' arm      3' arm
670	+	12659	90	21	-22.4	AP_000542		5' arm      3' arm
671	+	13213	90	21	-20.3	AP_000542		5' arm      3' arm
672	+	13981	85	22.5	-23.4	AP_000542		5' arm      3' arm
673	+	16288	88	20.5	-30.1	AP_000544		5' arm      3' arm
674	+	16546	89	19	-21.1	AP_000545		5' arm      3' arm
675	+	23661	90	22	-24.3	AP_000550		5' arm      3' arm
676	+	24872	89	23	-23.07	AP_000551		5' arm      3' arm
677	+	25140	87	21	-22.4	AP_000551		5' arm      3' arm
678	+	27607	87	21.5	-23.6	AP_000555		5' arm      3' arm
679	+	31178	90	19	-22.7	AP_000562		5' arm      3' arm
680	-	9117	90	23	-22.7	AP_000540		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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