miRNA display CGI

Results 1 - 20 of 39 are showing below:
Show page: 1 2

<< Previous Page | Next Page >>

ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
663	+	6868	85	19.5	-19.4	AP_000539		5' arm      3' arm
666	+	8963	89	22.5	-19.5	AP_000540		5' arm      3' arm
698	-	27243	90	20.5	-19.6	AP_000554		5' arm      3' arm
681	-	10961	90	25	-20.1	AP_000541		5' arm      3' arm
685	-	16491	90	20.5	-20.1	AP_000545		5' arm      3' arm
682	-	11233	90	25	-20.1	AP_000541		5' arm      3' arm
667	+	9530	89	23	-20.3	AP_000540		5' arm      3' arm
669	+	10593	88	23	-20.3			5' arm      3' arm
671	+	13213	90	21	-20.3	AP_000542		5' arm      3' arm
690	-	21327	89	19	-20.8	AP_000548		5' arm      3' arm
674	+	16546	89	19	-21.1	AP_000545		5' arm      3' arm
697	-	26345	90	19	-21.4	AP_000553		5' arm      3' arm
695	-	25386	90	21	-21.6	AP_000551		5' arm      3' arm
686	-	16914	90	24.5	-21.8	AP_000545		5' arm      3' arm
670	+	12659	90	21	-22.4	AP_000542		5' arm      3' arm
677	+	25140	87	21	-22.4	AP_000551		5' arm      3' arm
680	-	9117	90	23	-22.7	AP_000540		5' arm      3' arm
679	+	31178	90	19	-22.7	AP_000562		5' arm      3' arm
688	-	18509	86	19	-23	AP_000547		5' arm      3' arm
676	+	24872	89	23	-23.07	AP_000551		5' arm      3' arm

<< Previous Page | Next Page >>

* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

Download Candidate Sequences

Back To miRNA display CGI home