miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
625	+	25905	90	22	-37.3	AP_000515		5' arm      3' arm
632	-	10736	87	23	-36.1			5' arm      3' arm
651	-	26294	86	24.5	-35	AP_000515		5' arm      3' arm
649	-	24732	90	20	-32.7	AP_000515		5' arm      3' arm
622	+	23924	83	21	-32	AP_000514		5' arm      3' arm
620	+	22645	82	19.5	-30.74	AP_000514		5' arm      3' arm
604	+	4537	90	25	-29.9	AP_000502		5' arm      3' arm
635	-	12674	86	22.5	-29.7	AP_000506		5' arm      3' arm
628	-	2182	84	21	-29.5	AP_000499		5' arm      3' arm
633	-	11172	90	23	-29.2	AP_000505		5' arm      3' arm
653	-	26835	89	24	-28.8	AP_000517		5' arm      3' arm
641	-	16258	89	22	-28.7	AP_000508		5' arm      3' arm
659	-	34626	89	19.5	-28.5	AP_000531		5' arm      3' arm
613	+	10203	86	19.5	-28.2	AP_000504		5' arm      3' arm
644	-	19241	90	21.5	-28	AP_000512		5' arm      3' arm
626	+	34940	75	20	-27.8	AP_000532		5' arm      3' arm
602	+	1752	89	21	-27.7	AP_000499		5' arm      3' arm
619	+	20400	87	24.5	-27.3	AP_000512		5' arm      3' arm
636	-	13127	90	20	-27.2	AP_000506		5' arm      3' arm
612	+	10087	75	21	-27	AP_000504		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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