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GenBank Identifier | RefSeq Acc. | Name |
9629096 | NC_001734.1 | Canine adenovirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5023 | + | 1656 | 84 | 22.5 | -22.9 | NP_044185 | 5' arm 3' arm | ||
5024 | + | 8565 | 88 | 19 | -21.5 | NP_044190 | 5' arm 3' arm | ||
5025 | + | 11137 | 89 | 21 | -20.7 | NP_044192 | 5' arm 3' arm | ||
5026 | + | 21376 | 88 | 19 | -27.7 | NP_044200 | 5' arm 3' arm | ||
5027 | - | 7612 | 89 | 20 | -26.2 | 5' arm 3' arm | |||
5028 | - | 14343 | 90 | 21 | -25.3 | NP_044194 | 5' arm 3' arm | ||
5029 | - | 14956 | 89 | 19.5 | -29.6 | NP_044195 | 5' arm 3' arm | ||
5030 | - | 16488 | 90 | 23 | -20.1 | NP_044197 | 5' arm 3' arm | ||
5031 | - | 16630 | 89 | 20.5 | -21.7 | NP_044197 | 5' arm 3' arm | ||
5032 | - | 17271 | 90 | 24 | -21.2 | NP_044198 | 5' arm 3' arm | ||
5033 | - | 23843 | 88 | 22.5 | -19.7 | NP_044202 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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