miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
574	+	3781	89	21	-19.4	AP_000441		5' arm      3' arm
575	+	4394	88	21.5	-26.9	AP_000442		5' arm      3' arm
576	+	5228	89	19.5	-22.1	AP_000442		5' arm      3' arm
577	+	8097	89	21.5	-19.6	AP_000443		5' arm      3' arm
578	+	9544	89	23	-23.5	AP_000444		5' arm      3' arm
579	+	10164	89	22.5	-21.2	AP_000444		5' arm      3' arm
580	+	11219	82	19.5	-25.6	AP_000445		5' arm      3' arm
581	+	12800	86	19	-25.4	AP_000446		5' arm      3' arm
582	+	13517	84	20	-19.8	AP_000446		5' arm      3' arm
583	+	16128	87	19	-26.9	AP_000449		5' arm      3' arm
584	+	23111	87	19	-19.7	AP_000454		5' arm      3' arm
585	+	27162	90	24	-25.9	AP_000459		5' arm      3' arm
586	-	1380	90	21	-23.8	AP_000438		5' arm      3' arm
587	-	3613	90	20	-19.5	AP_000441		5' arm      3' arm
588	-	4481	88	22	-24.8	AP_000442		5' arm      3' arm
589	-	10771	88	26.5	-29.1	AP_000445		5' arm      3' arm
590	-	11303	89	24	-22.2	AP_000445		5' arm      3' arm
591	-	15718	89	20.5	-21.1	AP_000448		5' arm      3' arm
592	-	15958	90	24	-20.1	AP_000448		5' arm      3' arm
593	-	16988	89	21.5	-19.6	AP_000449		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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