miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17345	+	149293	90	19	-25.4			5' arm      3' arm
17274	+	23092	90	23	-20.5			5' arm      3' arm
17388	-	133251	88	21.5	-35.5			5' arm      3' arm
17273	+	22248	90	21	-31.2			5' arm      3' arm
17271	+	16550	86	20.5	-26			5' arm      3' arm
17336	+	146341	90	19	-25.4			5' arm      3' arm
17337	+	146669	90	19	-25.4			5' arm      3' arm
17303	+	124688	87	22	-23.5			5' arm      3' arm
17296	+	121344	88	20	-22.3			5' arm      3' arm
17295	+	121253	89	20	-27.4			5' arm      3' arm
17294	+	120613	89	21.5	-19.6			5' arm      3' arm
17297	+	121776	87	22	-23.5			5' arm      3' arm
17293	+	116490	89	19.5	-25.9			5' arm      3' arm
17291	+	115615	81	21.5	-32.6			5' arm      3' arm
17292	+	116242	90	23	-20.5			5' arm      3' arm
17290	+	115499	89	24	-27.8			5' arm      3' arm
17333	+	145357	90	19	-25.4			5' arm      3' arm
17335	+	146013	90	19	-25.4			5' arm      3' arm
17288	+	88426	89	21.5	-28.4			5' arm      3' arm
17334	+	145685	90	19	-25.4			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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