miRNA display CGI


Results 1 - 8 of 8 are showing below:
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GenBank Identifier RefSeq Acc. Name
9633619 NC_000940.1 Porcine enteric calicivirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
1109 + 142 88 24 -26.8 NP_051035 5' arm      3' arm
1110 - 744 90 21 -21.6 NP_051035 5' arm      3' arm
1111 - 3341 83 21 -22.5 NP_051035 5' arm      3' arm
1112 - 3509 90 22.5 -19.8 NP_051035 5' arm      3' arm
1113 - 3708 90 19 -22.8 NP_051035 5' arm      3' arm
1114 - 4456 90 19 -22 NP_051035 5' arm      3' arm
1115 - 5431 88 20 -19.7 NP_051035 5' arm      3' arm
1116 - 7258 82 20.5 -25.71 NP_051036 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.