miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27312	+	94215	88	23.5	-19.4	YP_006578		5' arm      3' arm
27310	+	92589	89	22	-22.1	YP_006576		5' arm      3' arm
27309	+	90952	89	21.5	-22.2	YP_006575		5' arm      3' arm
27330	-	82563	87	22	-37.4	YP_006559		5' arm      3' arm
27308	+	79641	85	22.5	-25	YP_006554		5' arm      3' arm
27307	+	74145	89	21	-21.9	YP_006545		5' arm      3' arm
27306	+	70699	90	22	-22.4	YP_006541		5' arm      3' arm
27304	+	68191	87	25.5	-20.4	YP_006537		5' arm      3' arm
27302	+	57773	88	19	-20.7	YP_006526		5' arm      3' arm
27301	+	50599	90	20.5	-25.8	YP_006517		5' arm      3' arm
27299	+	48710	88	21	-22	YP_006515		5' arm      3' arm
27327	-	48798	90	20.5	-21.6	YP_006515		5' arm      3' arm
27300	+	48802	89	22	-22.3	YP_006515		5' arm      3' arm
27326	-	40848	86	25	-22.9	YP_006506		5' arm      3' arm
27322	-	32332	89	21.5	-24.9	YP_006502		5' arm      3' arm
27297	+	36373	89	21.5	-24.9	YP_006502		5' arm      3' arm
27293	+	32595	88	22.5	-20.1	YP_006502		5' arm      3' arm
27325	-	36110	88	22.5	-20.1	YP_006502		5' arm      3' arm
27295	+	34144	90	22.5	-19.8	YP_006500		5' arm      3' arm
27323	-	34233	90	22	-20	YP_006500		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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