miRNA display CGI


Results 1 - 20 of 48 are showing below:
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GenBank Identifier RefSeq Acc. Name
46401626 NC_005856.1 Enterobacteria phage P1 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27313 - 2378 90 20 -34.5 YP_006474 5' arm      3' arm
27294 + 33598 90 20.5 -20.3 5' arm      3' arm
27296 + 34297 88 19 -26.8 5' arm      3' arm
27300 + 48802 89 22 -22.3 YP_006515 5' arm      3' arm
27299 + 48710 88 21 -22 YP_006515 5' arm      3' arm
27298 + 48283 86 19.5 -24.9 5' arm      3' arm
27301 + 50599 90 20.5 -25.8 YP_006517 5' arm      3' arm
27302 + 57773 88 19 -20.7 YP_006526 5' arm      3' arm
27303 + 62808 88 20.5 -26.6 5' arm      3' arm
27297 + 36373 89 21.5 -24.9 YP_006502 5' arm      3' arm
27295 + 34144 90 22.5 -19.8 YP_006500 5' arm      3' arm
27293 + 32595 88 22.5 -20.1 YP_006502 5' arm      3' arm
27286 + 8312 90 24 -21.9 5' arm      3' arm
27285 + 8197 85 19 -22.2 5' arm      3' arm
27287 + 10101 85 20.5 -22.56 YP_006478 5' arm      3' arm
27288 + 11267 90 20.5 -21 YP_006479 5' arm      3' arm
27290 + 17499 86 22 -19.7 YP_006480 5' arm      3' arm
27291 + 17738 89 21.5 -24.5 YP_006480 5' arm      3' arm
27289 + 15292 89 21 -20.4 YP_006479 5' arm      3' arm
27292 + 31838 87 21.5 -19.4 YP_006499 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.