miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27316	-	18808	90	24	-22.5	YP_006480		5' arm      3' arm
27306	+	70699	90	22	-22.4	YP_006541		5' arm      3' arm
27321	-	31213	90	19.5	-22.4	YP_006497		5' arm      3' arm
27300	+	48802	89	22	-22.3	YP_006515		5' arm      3' arm
27285	+	8197	85	19	-22.2			5' arm      3' arm
27309	+	90952	89	21.5	-22.2	YP_006575		5' arm      3' arm
27310	+	92589	89	22	-22.1	YP_006576		5' arm      3' arm
27314	-	9693	89	21	-22			5' arm      3' arm
27299	+	48710	88	21	-22	YP_006515		5' arm      3' arm
27286	+	8312	90	24	-21.9			5' arm      3' arm
27307	+	74145	89	21	-21.9	YP_006545		5' arm      3' arm
27327	-	48798	90	20.5	-21.6	YP_006515		5' arm      3' arm
27318	-	26330	83	20	-21.4	YP_006491		5' arm      3' arm
27288	+	11267	90	20.5	-21	YP_006479		5' arm      3' arm
27302	+	57773	88	19	-20.7	YP_006526		5' arm      3' arm
27315	-	11639	90	19.5	-20.7	YP_006479		5' arm      3' arm
27317	-	22771	88	20	-20.5	YP_006487		5' arm      3' arm
27289	+	15292	89	21	-20.4	YP_006479		5' arm      3' arm
27304	+	68191	87	25.5	-20.4	YP_006537		5' arm      3' arm
27294	+	33598	90	20.5	-20.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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