miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27322	-	32332	89	21.5	-24.9	YP_006502		5' arm      3' arm
27292	+	31838	87	21.5	-19.4	YP_006499		5' arm      3' arm
27291	+	17738	89	21.5	-24.5	YP_006480		5' arm      3' arm
27309	+	90952	89	21.5	-22.2	YP_006575		5' arm      3' arm
27297	+	36373	89	21.5	-24.9	YP_006502		5' arm      3' arm
27328	-	54614	90	21	-27.4			5' arm      3' arm
27314	-	9693	89	21	-22			5' arm      3' arm
27320	-	30865	64	21	-26.5	YP_006496		5' arm      3' arm
27299	+	48710	88	21	-22	YP_006515		5' arm      3' arm
27307	+	74145	89	21	-21.9	YP_006545		5' arm      3' arm
27289	+	15292	89	21	-20.4	YP_006479		5' arm      3' arm
27294	+	33598	90	20.5	-20.3			5' arm      3' arm
27301	+	50599	90	20.5	-25.8	YP_006517		5' arm      3' arm
27303	+	62808	88	20.5	-26.6			5' arm      3' arm
27327	-	48798	90	20.5	-21.6	YP_006515		5' arm      3' arm
27287	+	10101	85	20.5	-22.56	YP_006478		5' arm      3' arm
27288	+	11267	90	20.5	-21	YP_006479		5' arm      3' arm
27318	-	26330	83	20	-21.4	YP_006491		5' arm      3' arm
27313	-	2378	90	20	-34.5	YP_006474		5' arm      3' arm
27317	-	22771	88	20	-20.5	YP_006487		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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