miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7112	+	6875	89	23	-23.4	NP_046764		5' arm      3' arm
7107	+	5347	88	22.5	-22.6	NP_046761		5' arm      3' arm
7111	+	6770	89	22	-22.4	NP_046764		5' arm      3' arm
7108	+	5678	88	21.5	-25.2	NP_046761		5' arm      3' arm
7109	+	6320	88	21	-25	NP_046762		5' arm      3' arm
7113	+	7339	90	21	-20.8	NP_046765		5' arm      3' arm
7144	-	17947	87	22	-22.3	NP_046778		5' arm      3' arm
7145	-	18325	81	19.5	-19.5	NP_046778		5' arm      3' arm
7140	-	11666	89	24.5	-23.2	NP_046773		5' arm      3' arm
7142	-	13190	82	20	-20.3	NP_046775		5' arm      3' arm
7141	-	12055	84	20	-21.1	NP_046773		5' arm      3' arm
7138	-	9097	89	23.5	-22.8	NP_046769		5' arm      3' arm
7143	-	17684	87	23.5	-23.8			5' arm      3' arm
7146	-	19801	90	19.5	-25.5	NP_046780		5' arm      3' arm
7149	-	21250	88	20	-24.6	NP_046782		5' arm      3' arm
7150	-	21568	86	20.5	-24.2	NP_046782		5' arm      3' arm
7147	-	20051	90	21	-20.5	NP_046782		5' arm      3' arm
7148	-	20611	87	22.5	-29.3	NP_046782		5' arm      3' arm
7151	-	23453	81	23	-23.4	NP_046784		5' arm      3' arm
7133	-	5765	88	19	-22.7	NP_046761		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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