miRNA display CGI


Results 1 - 17 of 17 are showing below:
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GenBank Identifier RefSeq Acc. Name
9627507 NC_001609.1 Bacteriophage P4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3476 + 6901 76 22 -23.4 5' arm      3' arm
3481 - 6155 87 20.5 -22.8 NP_042036 5' arm      3' arm
3479 - 5288 87 21 -20.1 NP_042036 5' arm      3' arm
3482 - 6340 88 22.5 -26.5 NP_042036 5' arm      3' arm
3480 - 5592 90 23 -25.4 NP_042036 5' arm      3' arm
3487 - 10777 89 20 -23.5 NP_042043 5' arm      3' arm
3486 - 10224 90 20.5 -26 NP_042042 5' arm      3' arm
3483 - 6924 89 21 -25.2 NP_042036 5' arm      3' arm
3484 - 7853 88 21 -28.5 5' arm      3' arm
3485 - 8473 89 21 -28.4 NP_042040 5' arm      3' arm
3488 - 11192 86 21 -20.3 NP_042044 5' arm      3' arm
3477 + 9723 89 19.5 -25.6 NP_042042 5' arm      3' arm
3475 + 6345 87 21 -25.6 NP_042036 5' arm      3' arm
3474 + 5546 90 21 -20 NP_042036 5' arm      3' arm
3472 + 5121 88 21 -25.6 NP_042036 5' arm      3' arm
3473 + 5381 88 21.5 -19.8 NP_042036 5' arm      3' arm
3478 - 3816 90 19 -21.5 NP_042035 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.