miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9628600 NC_001697.1 Haemophilus phage HP1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
4229 + 7779 87 19.5 -20.6 NP_043478 5' arm      3' arm
4230 + 21491 84 20 -19.5 5' arm      3' arm
4231 - 5404 84 21 -23.6 NP_043476 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.