miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23042	+	23487	90	20.5	-22.3	NP_938246		5' arm      3' arm
23043	+	23936	88	20	-20	NP_938248		5' arm      3' arm
23044	+	24413	90	19	-25.2	NP_938248		5' arm      3' arm
23045	+	24553	87	19	-23.4	NP_938248		5' arm      3' arm
23046	+	24680	80	19.5	-26.4	NP_938249		5' arm      3' arm
23047	+	24967	87	20.5	-23.4	NP_938249		5' arm      3' arm
23048	+	25144	90	20.5	-23.9	NP_938250		5' arm      3' arm
23049	+	25848	88	21	-24.9	NP_938251		5' arm      3' arm
23050	+	26164	87	22	-20.5	NP_938251		5' arm      3' arm
23051	+	26684	90	19	-26.6	NP_938251		5' arm      3' arm
23052	+	27992	88	23.5	-26.1	NP_938252		5' arm      3' arm
23053	+	29722	90	26	-23.3	NP_938254		5' arm      3' arm
23054	+	30389	89	20.5	-28.4	NP_938255		5' arm      3' arm
23055	+	30639	90	21	-24	NP_938255		5' arm      3' arm
23056	+	31391	86	22	-26	NP_938256		5' arm      3' arm
23057	+	31555	90	21.5	-26.4	NP_938256		5' arm      3' arm
23058	+	31869	90	19.5	-28.4	NP_938256		5' arm      3' arm
23059	+	31980	89	20.5	-22	NP_938256		5' arm      3' arm
23060	+	32084	90	20	-19.5	NP_938256		5' arm      3' arm
23061	+	32404	90	21	-24.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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