miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23135	-	22092	90	24.5	-21.9	NP_938242		5' arm      3' arm
23134	-	21469	89	23.5	-25	NP_938242		5' arm      3' arm
23131	-	20959	89	23	-19.6	NP_938241		5' arm      3' arm
23133	-	21242	90	22.5	-19.9	NP_938241		5' arm      3' arm
23130	-	20776	86	22.5	-37.2	NP_938240		5' arm      3' arm
23138	-	22819	88	22	-27.2	NP_938244		5' arm      3' arm
23129	-	20208	87	22	-22.3	NP_938240		5' arm      3' arm
23125	-	19615	90	21.5	-23			5' arm      3' arm
23124	-	19432	89	21.5	-25.2			5' arm      3' arm
23137	-	22720	90	21	-22.4	NP_938244		5' arm      3' arm
23132	-	21056	89	21	-21.7	NP_938241		5' arm      3' arm
23127	-	19884	89	20.5	-27.1			5' arm      3' arm
23139	-	23189	85	20	-22.4	NP_938245		5' arm      3' arm
23128	-	20094	90	20	-25.5	NP_938240		5' arm      3' arm
23136	-	22187	90	19.5	-20.2	NP_938242		5' arm      3' arm
23126	-	19750	90	19.5	-28.9			5' arm      3' arm
23112	-	15618	90	25	-29.1	NP_938234		5' arm      3' arm
23119	-	17473	88	24	-26.8	NP_938235		5' arm      3' arm
23123	-	18881	90	23.5	-29.2			5' arm      3' arm
23121	-	18036	90	22.5	-29	NP_938235		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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