miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2326	+	97	85	26	-33.9			5' arm      3' arm
2387	-	37829	89	24.5	-21.2	NP_040628		5' arm      3' arm
2332	+	3993	90	24	-24.4	NP_040583		5' arm      3' arm
2357	+	19476	90	24	-24	NP_040601		5' arm      3' arm
2385	-	18391	87	24	-28.7	NP_040600		5' arm      3' arm
2392	-	46380	86	23.5	-26.3	NP_040646		5' arm      3' arm
2358	+	21779	90	23.5	-20.3	NP_040604		5' arm      3' arm
2359	+	24134	90	23	-24.6			5' arm      3' arm
2346	+	13248	89	23	-21.1	NP_040596		5' arm      3' arm
2363	+	44780	89	23	-20			5' arm      3' arm
2391	-	44792	86	22.5	-27.2	NP_040643		5' arm      3' arm
2356	+	18594	84	22.5	-26.9	NP_040600		5' arm      3' arm
2369	-	3652	88	22.5	-28.6	NP_040583		5' arm      3' arm
2345	+	12646	90	22.5	-25.5	NP_040595		5' arm      3' arm
2340	+	9581	89	22	-21.8	NP_040592		5' arm      3' arm
2343	+	10855	90	22	-22.9	NP_040595		5' arm      3' arm
2350	+	14592	90	21.5	-27	NP_040598		5' arm      3' arm
2389	-	40390	87	21.5	-22.2	NP_040633		5' arm      3' arm
2330	+	3412	89	21.5	-29.3	NP_040583		5' arm      3' arm
2388	-	39110	90	21.5	-27.1	NP_040631		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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