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GenBank Identifier | RefSeq Acc. | Name |
22854993 | NC_004167.1 | Bacteriophage phi-105 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
16722 | - | 19240 | 85 | 19.5 | -22.3 | NP_690775 | 5' arm 3' arm | ||
16721 | - | 10661 | 88 | 20.5 | -22.9 | NP_690769 | 5' arm 3' arm | ||
16717 | + | 9707 | 90 | 24 | -23.5 | NP_690769 | 5' arm 3' arm | ||
16720 | - | 10005 | 87 | 20.5 | -23.7 | NP_690769 | 5' arm 3' arm | ||
16719 | + | 33389 | 79 | 20.5 | -24 | NP_690795 | 5' arm 3' arm | ||
16718 | + | 16023 | 90 | 21.5 | -24.9 | NP_690774 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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