miRNA display CGI


Results 1 - 20 of 154 are showing below:
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GenBank Identifier RefSeq Acc. Name
40807285 NC_001978.2 Bacteriophage phi-C31

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8154 + 41087 88 20 -19.4 NP_047976 5' arm      3' arm
8223 - 40118 89 19 -19.5 NP_047974 5' arm      3' arm
8188 - 21757 89 23 -19.6 5' arm      3' arm
8080 + 6755 85 23.5 -19.7 NP_047929 5' arm      3' arm
8072 + 1506 88 20.5 -19.8 NP_047924 5' arm      3' arm
8189 - 21903 90 19.5 -19.9 NP_047946 5' arm      3' arm
8152 + 40624 89 19.5 -19.9 5' arm      3' arm
8088 + 9351 90 20 -19.9 NP_047934 5' arm      3' arm
8177 - 16558 90 23 -20 NP_047940 5' arm      3' arm
8109 + 21618 79 22 -20.1 5' arm      3' arm
8082 + 7382 86 21.5 -20.1 NP_047930 5' arm      3' arm
8207 - 32962 90 21 -20.1 NP_047961 5' arm      3' arm
8165 - 8127 90 21 -20.1 NP_047931 5' arm      3' arm
8125 + 26354 89 19 -20.2 NP_047955 5' arm      3' arm
8074 + 3125 90 22.5 -20.2 NP_047925 5' arm      3' arm
8119 + 25059 90 19 -20.2 5' arm      3' arm
8122 + 25703 90 21 -20.2 NP_047955 5' arm      3' arm
8114 + 23220 88 19.5 -20.3 NP_047948 5' arm      3' arm
8160 - 5988 86 19.5 -20.4 NP_047927 5' arm      3' arm
8094 + 13535 90 21.5 -20.4 NP_047937 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.