miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8112	+	22321	89	19.5	-29.2	NP_047946		5' arm      3' arm
8113	+	22610	89	19.5	-25.4	NP_047946		5' arm      3' arm
8114	+	23220	88	19.5	-20.3	NP_047948		5' arm      3' arm
8115	+	23829	90	21.5	-31.7	NP_047949		5' arm      3' arm
8116	+	24161	90	19.5	-21	NP_047950		5' arm      3' arm
8117	+	24288	90	21	-36			5' arm      3' arm
8118	+	24604	88	23	-20.6	NP_047952		5' arm      3' arm
8119	+	25059	90	19	-20.2			5' arm      3' arm
8120	+	25216	88	21.5	-22.1	NP_047955		5' arm      3' arm
8121	+	25536	89	20.5	-22	NP_047955		5' arm      3' arm
8122	+	25703	90	21	-20.2	NP_047955		5' arm      3' arm
8123	+	25798	89	19.5	-20.6	NP_047955		5' arm      3' arm
8124	+	26120	89	22	-23	NP_047955		5' arm      3' arm
8125	+	26354	89	19	-20.2	NP_047955		5' arm      3' arm
8126	+	26477	90	20	-22.7	NP_047955		5' arm      3' arm
8127	+	26689	88	23.5	-23.5	NP_047955		5' arm      3' arm
8128	+	26853	87	20	-21.3	NP_047955		5' arm      3' arm
8129	+	27136	90	22.5	-27	NP_047955		5' arm      3' arm
8130	+	27503	90	23.5	-33.4			5' arm      3' arm
8131	+	28041	88	19.5	-21.3	NP_047956		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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