miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
22855045 NC_004166.1 Bacteriophage SPP1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16712 + 12495 88 20 -22 NP_690686 5' arm      3' arm
16713 + 32376 85 19 -24.7 NP_690727 5' arm      3' arm
16715 - 22271 90 19.5 -27.6 5' arm      3' arm
16716 - 24481 89 19 -20.2 NP_690711 5' arm      3' arm
16714 - 15471 87 19.5 -32.2 NP_690690 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.