miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8431	+	19242	86	19	-22.5	NP_597888		5' arm      3' arm
8426	+	15619	90	19	-25.8	NP_037684		5' arm      3' arm
8434	+	37083	87	19	-26.5			5' arm      3' arm
8430	+	17367	89	19.5	-19.4	NP_037684		5' arm      3' arm
8429	+	16336	87	19.5	-20.02	NP_037684		5' arm      3' arm
8425	+	15529	87	19.5	-21.5	NP_037684		5' arm      3' arm
8427	+	15955	86	19.5	-20.5	NP_037684		5' arm      3' arm
8438	-	8685	90	19.5	-19.7	NP_037676		5' arm      3' arm
8436	+	39841	90	19.5	-26.6			5' arm      3' arm
8420	+	5319	89	19.5	-19.9	NP_037667		5' arm      3' arm
8439	-	9480	84	20	-23.5	NP_037676		5' arm      3' arm
8440	-	11184	90	20	-29.1	NP_037677		5' arm      3' arm
8444	-	15344	90	20	-23.2	NP_037684		5' arm      3' arm
8418	+	2620	89	20	-25.2	NP_037664		5' arm      3' arm
8421	+	10551	90	20	-23.8	NP_037676		5' arm      3' arm
8443	-	14943	88	20.5	-29.8	NP_037684		5' arm      3' arm
8423	+	10912	88	20.5	-29	NP_037677		5' arm      3' arm
8448	-	24893	90	20.5	-28.2	NP_037689		5' arm      3' arm
8419	+	5155	86	20.5	-23.7			5' arm      3' arm
8417	+	2100	90	21	-21.7	NP_037664		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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