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GenBank Identifier | RefSeq Acc. | Name |
51236723 | NC_002371.2 | Enterobacteria phage P22 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8764 | + | 11647 | 90 | 19.5 | -21.8 | YP_063718 | 5' arm 3' arm | ||
8767 | + | 26039 | 89 | 19.5 | -23.2 | NP_059592 | 5' arm 3' arm | ||
8773 | - | 38176 | 84 | 19.5 | -22.9 | 5' arm 3' arm | |||
8762 | + | 5983 | 89 | 20 | -20.3 | NP_059630 | 5' arm 3' arm | ||
8770 | - | 5145 | 89 | 20 | -21.9 | 5' arm 3' arm | |||
8769 | - | 2216 | 87 | 20.5 | -20.3 | YP_063735 | 5' arm 3' arm | ||
8766 | + | 25373 | 89 | 21 | -21.6 | 5' arm 3' arm | |||
8763 | + | 9895 | 90 | 21.5 | -21.1 | YP_063717 | 5' arm 3' arm | ||
8768 | + | 40361 | 90 | 21.5 | -26.1 | 5' arm 3' arm | |||
8772 | - | 26929 | 85 | 21.5 | -22.2 | NP_059594 | 5' arm 3' arm | ||
8765 | + | 14030 | 90 | 22.5 | -20.3 | 5' arm 3' arm | |||
8771 | - | 5601 | 88 | 24.5 | -22.6 | NP_059630 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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