miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12039	+	8091	89	21.5	-24	NP_523308		5' arm      3' arm
12040	+	11285	80	22	-22	NP_523315		5' arm      3' arm
12041	+	11835	90	19.5	-25.4	NP_523316		5' arm      3' arm
12042	+	12723	89	19	-23.5	NP_523319		5' arm      3' arm
12043	+	17321	89	21.5	-20.4	NP_523329		5' arm      3' arm
12044	+	18627	86	19.5	-23	NP_523332		5' arm      3' arm
12045	+	19608	90	21.5	-21.3	NP_523332		5' arm      3' arm
12046	+	21231	89	20	-20.5	NP_523335		5' arm      3' arm
12047	+	25419	82	19.5	-21.7			5' arm      3' arm
12048	+	29236	90	19.5	-22.9	NP_523341		5' arm      3' arm
12049	+	32037	83	19	-25.5	NP_523341		5' arm      3' arm
12050	+	32730	90	19	-20.9			5' arm      3' arm
12051	+	35149	90	21.5	-24.6	NP_523345		5' arm      3' arm
12052	+	35348	81	21.5	-21.2	NP_523345		5' arm      3' arm
12053	-	4148	89	22.5	-22.3	NP_523301		5' arm      3' arm
12054	-	5215	80	19	-22	NP_523301		5' arm      3' arm
12055	-	21752	86	21	-19.8	NP_523335		5' arm      3' arm
12056	-	22761	87	19	-19.7	NP_523336		5' arm      3' arm
12057	-	23607	89	20	-22.6	NP_523337		5' arm      3' arm
12058	-	37840	90	19.5	-25			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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