miRNA display CGI


Results 1 - 20 of 20 are showing below:
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GenBank Identifier RefSeq Acc. Name
9627425 NC_001604.1 Enterobacteria phage T7

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3441 + 51 89 23.5 -27.1 5' arm      3' arm
3450 + 18721 90 20 -24.2 NP_041990 5' arm      3' arm
3453 + 27357 83 21.5 -20.7 NP_042001 5' arm      3' arm
3454 + 31028 90 20 -22.1 NP_042004 5' arm      3' arm
3456 + 34999 85 21.5 -22.2 NP_042005 5' arm      3' arm
3455 + 34522 90 19.5 -21.7 5' arm      3' arm
3458 + 39835 88 23 -21.7 5' arm      3' arm
3457 + 36928 90 21.5 -25.2 NP_042008 5' arm      3' arm
3460 - 21193 90 20 -21.1 NP_041995 5' arm      3' arm
3452 + 21740 89 21.5 -21.7 NP_041995 5' arm      3' arm
3451 + 21274 90 22 -25.3 NP_041995 5' arm      3' arm
3443 + 3746 89 23 -19.6 NP_041960 5' arm      3' arm
3442 + 834 85 19.5 -21.6 5' arm      3' arm
3445 + 8991 90 22.5 -23.3 NP_041969 5' arm      3' arm
3444 + 5219 88 22 -23.4 NP_041960 5' arm      3' arm
3449 + 18063 86 22 -19.6 NP_041988 5' arm      3' arm
3448 + 17875 90 21.5 -19.7 NP_041988 5' arm      3' arm
3447 + 16375 90 21 -21.9 NP_041982 5' arm      3' arm
3446 + 14440 87 19 -29.1 NP_041982 5' arm      3' arm
3459 - 11353 89 24.5 -21.9 NP_041974 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.