miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
21427641 NC_004015.1 Sorghum chlorotic spot virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15575 + 2721 88 21 -30.7 NP_659024 5' arm      3' arm
15571 + 726 89 23 -27.4 5' arm      3' arm
15573 + 1837 90 24.5 -26.9 NP_659023 5' arm      3' arm
15569 + 7 88 22 -24 5' arm      3' arm
15567 + 40 79 20.5 -23.8 5' arm      3' arm
15572 + 1711 87 29 -23.4 NP_659023 5' arm      3' arm
15568 + 3286 90 23 -22.7 NP_659020 5' arm      3' arm
15570 + 470 87 19.5 -20.47 NP_659022 5' arm      3' arm
15574 + 2160 90 22 -19.5 NP_659023 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.