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GenBank Identifier | RefSeq Acc. | Name |
31540430 | NC_004001.2 | Human adenovirus B |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15512 | + | 3781 | 89 | 21 | -19.4 | NP_852688 | 5' arm 3' arm | ||
15513 | + | 4394 | 88 | 21.5 | -26.9 | NP_852689 | 5' arm 3' arm | ||
15514 | + | 5228 | 89 | 19.5 | -22.1 | NP_852690 | 5' arm 3' arm | ||
15515 | + | 8097 | 89 | 21.5 | -19.6 | NP_852690 | 5' arm 3' arm | ||
15516 | + | 9544 | 89 | 23 | -23.5 | NP_852693 | 5' arm 3' arm | ||
15517 | + | 10164 | 89 | 22.5 | -21.2 | NP_852693 | 5' arm 3' arm | ||
15518 | + | 11220 | 82 | 19.5 | -25.6 | NP_852694 | 5' arm 3' arm | ||
15519 | + | 12801 | 86 | 19 | -25.4 | NP_852695 | 5' arm 3' arm | ||
15520 | + | 13518 | 84 | 20 | -19.8 | NP_852695 | 5' arm 3' arm | ||
15521 | + | 16129 | 87 | 19 | -26.9 | NP_852698 | 5' arm 3' arm | ||
15522 | + | 23112 | 87 | 19 | -19.7 | NP_852703 | 5' arm 3' arm | ||
15523 | + | 27163 | 90 | 24 | -25.9 | NP_852707 | 5' arm 3' arm | ||
15524 | - | 1380 | 90 | 21 | -23.8 | NP_852683 | 5' arm 3' arm | ||
15525 | - | 3613 | 90 | 20 | -19.5 | NP_852688 | 5' arm 3' arm | ||
15526 | - | 4481 | 88 | 22 | -24.8 | NP_852689 | 5' arm 3' arm | ||
15527 | - | 10772 | 88 | 26.5 | -29.1 | NP_852694 | 5' arm 3' arm | ||
15528 | - | 11304 | 89 | 24 | -22.2 | NP_852694 | 5' arm 3' arm | ||
15529 | - | 15719 | 89 | 20.5 | -21.1 | NP_852697 | 5' arm 3' arm | ||
15530 | - | 15959 | 90 | 24 | -20.1 | NP_852697 | 5' arm 3' arm | ||
15531 | - | 16989 | 89 | 21.5 | -19.6 | NP_852698 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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