miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
21493006 NC_004042.1 Bean golden mosaic virus DNA A

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15586 + 107 90 19 -27.1 5' arm      3' arm
15587 + 513 88 21 -20.3 NP_660082 5' arm      3' arm
15588 - 196 87 20 -26.9 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.