miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1298	+	227	85	19.5	-20	NP_039600		5' arm      3' arm
1299	+	696	90	21.5	-22.6	NP_039602		5' arm      3' arm
1300	+	947	89	22.5	-30.7	NP_039603		5' arm      3' arm
1301	+	1076	90	28	-21.1			5' arm      3' arm
1302	+	2726	90	23	-28.7	NP_039605		5' arm      3' arm
1303	+	2820	88	21	-21.9	NP_039605		5' arm      3' arm
1304	+	2948	87	22	-25.7	NP_039606		5' arm      3' arm
1305	+	4579	90	22.5	-22.7	NP_039607		5' arm      3' arm
1306	+	5231	89	21	-23.4	NP_039607		5' arm      3' arm
1307	+	5375	88	19	-26.6	NP_039607		5' arm      3' arm
1308	+	5818	86	22.5	-20.7	NP_039608		5' arm      3' arm
1309	+	6723	86	19	-20.9	NP_039611		5' arm      3' arm
1310	-	138	87	23	-23.1	NP_039600		5' arm      3' arm
1311	-	246	88	19	-22	NP_039600		5' arm      3' arm
1312	-	908	90	24	-24.4	NP_039603		5' arm      3' arm
1313	-	1040	87	20	-23.5	NP_039603		5' arm      3' arm
1314	-	2020	86	22.5	-25.7	NP_039604		5' arm      3' arm
1315	-	3034	87	24.5	-22.8	NP_039606		5' arm      3' arm
1316	-	3274	90	19.5	-25.5	NP_039606		5' arm      3' arm
1317	-	3578	90	22	-21.9	NP_039606		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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